RawTherapee’s lens info derives from ExifTool, and ExifTool shows the same:
$ exiftool -G0 DSC00074-1.jpg | grep -ai lens
[EXIF] Lens Make : Nikon
[EXIF] Lens Model : Series E 100mm 1:2.8
[MakerNotes] Lens Format : Unknown
[MakerNotes] Lens Mount : Unknown
[MakerNotes] Lens Zoom Position : 0%
[MakerNotes] Lens Type : E-Mount, T-Mount, Other Lens or no lens
[XMP] Lens : Series E 100mm 1:2.8
[Composite] Lens ID : Sony FE 100mm F2.8 STF GM OSS or Sony FE 70-200mm F2.8 GM OSS or Sony FE 70-200mm F2.8 GM OSS + 1.4X Teleconverter or Sony FE 70-200mm F2.8 GM OSS + 2X Teleconverter or Sigma 70-200mm F2.8 DG OS HSM | S
To understand why you see an array of possible lenses, you would need to look into ExifTool.
There is a branch of RawTherapee metadata-exiv2 which uses Exiv2, and that shows only your manually-edited lens.