When the frames are different, blending at overlaps creates a blurriness, losing detail. In the Wendy Liu example, the clouds and the water vary between frames, but the buildings are similar (they don’t move). @David_Tschumperle’s image almost entirely blurs the clouds. This may be desirable, of course.
Instead of blending, we can cut the images. This retains detail. When the cut line is vertical, the cuts are obvious.
The cut lines don’t need to be vertical, or even straight. We can make the cut lines jagged, like tearing a piece of paper, following a line from top to bottom that is the least difference between two images.

The cut lines are obvious at top-right, where the sky has no clouds, and the plain blue sky is different between frames, so there is no good cut line. Elsewhere, the cut lines are not obvious (for example, zoom in above the tallest tower), and we have retained detail in the clouds and water.
Here comes the code. First, extract the frames. (These are probably different to David_Tschumperle’s frames.)
ffmpeg -ss 10s -to 44s -i "Stunning New York City skyline timelapse Day to night.mp4" -r 0.75 x-%06d.jpg
A Windows BAT script, nt2day.bat
loops through the frames, combining frame 1 and 2, then the result with frame 3, then the result with frame 4, etc.
set OutFile=xMeander.png
%IMG7%magick x-000001.jpg %OutFile%
for /L %%N in (1,1,26) do (
set LZ1=000000%%N
set LZ1=!LZ1:~-6!
set /A LZ2=%%N+1
set LZ2=000000!LZ2!
set LZ2=!LZ2:~-6!
set /A StartCol=640*^(%%N-1^)/26
echo !LZ1! !LZ2! !StartCol!
rem call combFrame %OutFile% x-!LZ2!.jpg %OutFile% !StartCol! 25
rem call combFrame %OutFile% x-!LZ2!.jpg %OutFile% 7 633
call combFrame %OutFile% x-!LZ2!.jpg %OutFile% !StartCol! 200
)
combFrame.bat
crops an area of full-height columns from both images, finds the absolute difference, and the darkest meandering path from top of bottom of that difference.
I tried out three variations of the stating column and width of the area to search for the best cut line.
rem %1 and %2 input images, same size
rem %3 output for combined image
rem %4 start column number for cut-line
rem %5 width of cut-line area
set InFile1=%1
set InFile2=%2
set OutFile=%3
set ColStart=%4
set ColWidth=%5
rem The mask will be black on left of cut-line, white on right.
%IM7DEV%magick ^
( %InFile1% ^
+write mpr:In1 ^
-set option:WW %%w ^
-crop %ColWidth%x+%ColStart%+0 +repage ^
) ^
( %InFile2% ^
+write mpr:In2 ^
-crop %ColWidth%x+%ColStart%+0 +repage ^
) ^
-compose Difference -composite ^
-compose Over ^
-process 'darkestmeander' ^
( +clone ^
-scale "1x^!" ^
-fill Black -colorize 100 ^
) ^
+append +repage ^
-fill White -draw "color %%[fx:w-1],0 floodfill" ^
-crop %%[fx:w-1]x+0+0 +repage ^
-alpha off ^
-background Black -gravity East -extent %%[fx:w+%ColStart%]x ^
-background White -gravity West -extent %%[fx:WW]x ^
-write mpr:MASK ^
+delete ^
mpr:In1 mpr:In2 mpr:MASK ^
-compose Over -composite ^
%OutFile%
Process darkestmeander
is an add-on to ImageMagick. It is documented at Dark paths. To use it, IM must be built with my Process modules.